STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCNP00005023222annotation not available (558 aa)    
Predicted Functional Partners:
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.778
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.713
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
  
 0.620
PDCD11
Programmed cell death 11.
  
    0.614
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.542
POP5
POP5 homolog, ribonuclease P/MRP subunit.
     
 0.535
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
      
 0.524
CCNE2
Cyclin E2.
   
  
 0.521
CCNE1
Cyclin E1.
   
  
 0.521
RPP21
Ribonuclease P/MRP subunit p21.
     
 0.515
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.