STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS3BCAS3 microtubule associated cell migration factor. (950 aa)    
Predicted Functional Partners:
C16orf70
Chromosome E2 C16orf70 homolog.
   
 
 0.940
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.832
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.788
BCAS4
Breast carcinoma amplified sequence 4.
      
 0.769
WDR45B
WD repeat domain 45B.
   
  
 0.769
ZNF407
Zinc finger protein 407.
      
 0.757
SEL1L3
SEL1L family member 3.
   
  
 0.746
SUSD4
Sushi domain containing 4.
      
 0.709
AXDND1
Axonemal dynein light chain domain containing 1.
      
 0.698
WDR45
PRA1 domain family member 2.
   
  
 0.692
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.