STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit. (423 aa)    
Predicted Functional Partners:
PRORP
Protein only RNase P catalytic subunit.
   
 0.987
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.986
TRMT61B
tRNA methyltransferase 61B.
   
 0.958
TRMT6
tRNA methyltransferase 6.
   
 
 0.945
TRMT61A
tRNA methyltransferase 61A.
   
 0.939
RPP40
Ribonuclease P/MRP subunit p40.
    
  0.912
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
 
  0.909
WDR4
WD repeat domain 4.
   
 0.898
RPF1
Ribosome production factor 1 homolog.
   
  
 0.853
RPP21
Ribonuclease P/MRP subunit p21.
   
 
  0.838
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.