STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS8Serine protease 8. (331 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.595
TMEM63A
Transmembrane protein 63A.
   
  
 0.518
GALNT7
Polypeptide N-acetylgalactosaminyltransferase 7.
     
 0.470
ST3GAL3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
      
 0.454
LOC115509608
Neuroendocrine secretory protein 55.
    
  0.441
SERPING1
Serpin family G member 1.
    
 0.428
TMPRSS4
Transmembrane serine protease 4.
  
0.421
SERPINA5
Serpin family A member 5.
   
 0.415
SERPINB12
Serpin family B member 12.
    
 0.413
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
    
 0.411
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.