STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC2IQ motif and Sec7 domain ArfGEF 2. (1488 aa)    
Predicted Functional Partners:
BBOF1
Basal body orientation factor 1.
      
 0.722
RPS6KA6
Ribosomal protein S6 kinase A6.
      
 0.704
ZNFX1
Zinc finger NFX1-type containing 1.
      
 0.652
ARF6
ADP ribosylation factor 6.
    
 
 0.643
CTC1
CST telomere replication complex component 1.
      
 0.622
BORCS5
BLOC-1 related complex subunit 5.
      
 0.606
DLGAP1
DLG associated protein 1.
   
 
 0.561
OPRL1
Opioid related nociceptin receptor 1.
   
  
 0.530
SYNGAP1
Synaptic Ras GTPase activating protein 1.
    
 
 0.528
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
    
 
 0.523
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.