STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX2LIM homeobox 2. (406 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.894
LDB2
LIM domain binding 2.
    
 0.830
ENSLCNP00005034007
annotation not available
    
 
 0.732
MSX2
Msh homeobox 2.
    
 
 0.680
GATA3
GATA binding protein 3.
    
 0.648
FOXN1
Forkhead box N1.
   
 
 0.619
FOXG1
Forkhead box G1.
   
 
 0.614
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 0.571
FEZF1
FEZ family zinc finger 1.
  
 
 0.555
LMO1
LIM domain only 1.
   
 
0.545
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.