STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1. (177 aa)    
Predicted Functional Partners:
EXOSC8
Exosome component 8.
   
 
  0.926
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
    
 0.925
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
    
 0.917
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
    
 0.910
EXOSC10
Exosome component 10.
    
 0.903
MTREX
Mtr4 exosome RNA helicase.
    
 0.899
EXOSC5
Exosome component 5.
     
 0.873
SUPV3L1
Suv3 like RNA helicase.
     
 0.823
EXOSC4
Exosome component 4.
     
 0.805
EXOSC9
Exosome component 9.
    
  0.788
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.