STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRXN1Sulfiredoxin 1. (141 aa)    
Predicted Functional Partners:
PRDX1
Peroxiredoxin 1.
   
 0.983
PRDX2
Peroxiredoxin 2.
   
 0.906
PRDX3
Peroxiredoxin 3.
   
 0.867
PRDX4
Peroxiredoxin 4.
   
 0.866
DENND10
DENN domain containing 10.
   
 0.821
ENSLCNP00005023365
annotation not available
   
 0.799
PRDX6
Peroxiredoxin 6.
   
 0.799
TXNRD1
Thioredoxin reductase 1.
   
  
 0.652
STK4
Serine/threonine kinase 4.
      
 0.638
GCLM
Glutamate-cysteine ligase modifier subunit.
   
  
 0.637
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.