STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCN1Transcobalamin 1. (433 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.971
CBLIF
Cobalamin binding intrinsic factor.
  
  
0.923
LOC115503193
Chymotrypsinogen 2.
   
 
 0.723
LOC115502841
Chymotrypsinogen B.
   
 
 0.723
RHBG
Rh family B glycoprotein.
      
 0.688
CDCP2
CUB domain containing protein 2.
    
 0.665
GAST
Gastrin.
      
 0.611
BHLHA15
Basic helix-loop-helix family member a15.
   
  
 0.606
ATP4B
ATPase H+/K+ transporting subunit beta.
   
  
 0.548
TFF2
Trefoil factor 2.
   
  
 0.540
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.