STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB12Ankyrin repeat and SOCS box containing 12. (319 aa)    
Predicted Functional Partners:
TMPRSS9
Transmembrane serine protease 9.
    
 0.691
LIMS1
LIM zinc finger domain containing 1.
    
 0.671
RLIM
Ring finger protein, LIM domain interacting.
     
 0.653
ATP8B2
ATPase phospholipid transporting 8B2.
   
 
 0.625
ZDHHC15
Zinc finger DHHC-type containing 15.
      
 0.616
PTER
Phosphotriesterase related.
     
 0.609
ASB2
Ankyrin repeat and SOCS box containing 2.
  
 
0.601
ASB6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.600
ASB18
Ankyrin repeat and SOCS box containing 18.
  
 
 0.597
DPF2
Double PHD fingers 2.
    
 
 0.589
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.