STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR19Proline rich 19. (357 aa)    
Predicted Functional Partners:
FAM133B
Family with sequence similarity 133 member B.
      
 0.612
C3orf70
Chromosome C2 C3orf70 homolog.
      
 0.612
CCDC73
Coiled-coil domain containing 73.
      
 0.612
CARD14
Caspase recruitment domain family member 14.
      
 0.530
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
      
 0.519
FNDC8
Fibronectin type III domain containing 8.
  
     0.515
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
      
 0.509
CERS3
Ceramide synthase 3.
      
 0.452
EIF3M
Eukaryotic translation initiation factor 3 subunit M.
      
 0.452
HS6ST2
Heparan sulfate 6-O-sulfotransferase 2.
      
 0.451
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.