STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM47Transmembrane protein 47. (181 aa)    
Predicted Functional Partners:
DEPDC7
DEP domain containing 7.
      
 0.700
RASL10B
RAS like family 10 member B.
      
 0.651
ZNF227
Zinc finger protein 227.
      
 0.647
PRRG1
Proline rich and Gla domain 1.
      
 0.640
TMEM183A
Transmembrane protein 183A.
   
  
 0.622
CPXM1
Carboxypeptidase X, M14 family member 1.
      
 0.619
RASL11B
RAS like family 11 member B.
      
 0.609
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.607
KRT23
Keratin 23.
      
 0.588
ENSLCNP00005015267
annotation not available
   
  
 0.526
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.