STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS37DVPS37D subunit of ESCRT-I. (251 aa)    
Predicted Functional Partners:
MVB12B
Multivesicular body subunit 12B.
   
 0.996
VPS28
VPS28 subunit of ESCRT-I.
   
 0.994
UBAP1
Ubiquitin associated protein 1.
    
 0.994
MVB12A
Multivesicular body subunit 12A.
   
 0.993
UEVLD
UEV and lactate/malate dehyrogenase domains.
   
 0.984
VPS37A
VPS37A subunit of ESCRT-I.
     
0.975
VPS36
Vacuolar protein sorting 36 homolog.
     
 0.974
CHMP1A
Charged multivesicular body protein 1A.
   
 
 0.974
VPS25
Vacuolar protein sorting 25 homolog.
    
 0.970
VPS37B
VPS37B subunit of ESCRT-I.
     
0.962
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.