STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM12BRNA binding motif protein 12B. (994 aa)    
Predicted Functional Partners:
YLPM1
YLP motif containing 1.
      
 0.791
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.632
TSC22D1
TSC22 domain family member 1.
      
 0.605
LOC115510657
TSC22 domain family protein 1.
      
 0.605
DAZAP1
DAZ associated protein 1.
   
 
 0.568
RBM17
RNA binding motif protein 17.
   
  
 0.551
ENSLCNP00005005786
annotation not available
      
 0.528
ABI1
Abl interactor 1.
      
 0.528
ENSLCNP00005029909
annotation not available
      
 0.520
PSPC1
Paraspeckle component 1.
   
  
 0.472
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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