STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VBP1VHL binding protein 1. (197 aa)    
Predicted Functional Partners:
PFDN6
Prefoldin subunit 6.
   
 0.999
ENSLCNP00005010454
annotation not available
   
 0.999
PFDN2
Prefoldin subunit 2.
   
 0.999
PFDN1
Prefoldin subunit 1.
   
 0.995
PFDN5
Prefoldin subunit 5.
   
 0.995
ENSLCNP00005015980
annotation not available
   
 0.995
ENSLCNP00005029224
annotation not available
   
 0.995
PDRG1
P53 and DNA damage regulated 1.
    
 0.984
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.866
TCP1
T-complex 1.
   
 0.859
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.