STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPV3L1Suv3 like RNA helicase. (744 aa)    
Predicted Functional Partners:
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
   
 0.977
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
   
 0.974
EXOSC7
Exosome component 7.
   
 
  0.924
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
 0.921
EXOSC8
Exosome component 8.
   
 
  0.919
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
 0.916
EXOSC10
Exosome component 10.
     
 0.916
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
 0.912
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.876
ENSLCNP00005014752
annotation not available
   
 0.845
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.