STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6GATA binding protein 6. (593 aa)    
Predicted Functional Partners:
LMCD1
LIM and cysteine rich domains 1.
    
 0.946
SOX17
SRY-box transcription factor 17.
   
 0.899
FOXA2
Forkhead box A2.
    
 0.868
FOXA3
Forkhead box A3.
   
 0.829
FOXA1
Forkhead box A1.
    
 0.822
SOX7
SRY-box transcription factor 7.
    
 0.812
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.806
NKX2-5
NK2 homeobox 5.
   
 0.801
ARID4A
AT-rich interaction domain 4A.
   
 0.714
ARID4B
AT-rich interaction domain 4B.
   
 0.713
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.