STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGF2BP1Insulin like growth factor 2 mRNA binding protein 1. (577 aa)    
Predicted Functional Partners:
DHX9
DExH-box helicase 9.
    
 0.928
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
    
 0.889
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
    
 0.869
CSDE1
Cold shock domain containing E1.
    
 0.785
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.763
YBX1
Y-box binding protein 1.
   
 0.724
METTL16
Methyltransferase like 16.
   
  
 0.673
YTHDC2
YTH domain containing 2.
    
 0.652
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
    
 
 0.642
YTHDF2
YTH N6-methyladenosine RNA binding protein 2.
    
 
 0.609
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.