STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX58DExD/H-box helicase 58. (929 aa)    
Predicted Functional Partners:
MAVS
Mitochondrial antiviral signaling protein.
    
 0.999
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.992
ISG15
ISG15 ubiquitin like modifier.
   
 0.990
DHX58
DExH-box helicase 58.
   
0.979
TRIM25
Tripartite motif containing 25.
   
 0.978
ATG12
Autophagy related 12.
    
 0.951
ATG5
Autophagy related 5.
    
 0.951
TRAF6
TNF receptor associated factor 6.
   
 0.951
ENSLCNP00005023697
annotation not available
   
 0.949
ENSLCNP00005034832
annotation not available
   
 0.948
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.