STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VS57Short-chain dehydrogenase/reductase SDR. (226 aa)    
Predicted Functional Partners:
A0A1Y1W0Y7
Ferredoxin.
  
 0.740
A0A1Y1WJS0
NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.733
A0A1Y1VWZ9
NAD(P)-binding protein.
     
 0.727
A0A1Y1WG63
HAD-like protein.
    
 0.694
A0A1Y1W959
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.669
A0A1Y1WA79
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.669
A0A1Y1WBP7
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 0.669
DL89DRAFT_3721
Acyl-carrier-protein S-malonyltransferase.
  
 0.669
A0A1Y1W338
Thiolase-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.662
A0A1Y1WEF3
Uncharacterized protein.
   
 
 0.616
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.