STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VSL9Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (122 aa)    
Predicted Functional Partners:
A0A1Y1W2M2
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.982
A0A1Y1WJB2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.982
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.982
A0A1Y1VXF4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.981
A0A1Y1VY91
S10_plectin domain-containing protein.
   
 0.981
A0A1Y1VZV2
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.981
A0A1Y1W1A3
Ribosomal protein S19e.
  
 0.981
A0A1Y1W4B6
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.981
A0A1Y1W621
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.981
A0A1Y1WAI1
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.981
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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