STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VSS7Uncharacterized protein. (526 aa)    
Predicted Functional Partners:
A0A1Y1W526
KOW domain-containing protein.
  
 0.879
A0A1Y1W6J0
Ribosomal protein, large subunit.
  
 0.878
A0A1Y1WC72
Uncharacterized protein.
  
 0.876
A0A1Y1W2I5
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.875
A0A1Y1W2M6
Putative 60s ribosomal protein l7.
  
 0.875
A0A1Y1VU19
Ribosomal_L18_c domain-containing protein.
  
 0.874
A0A1Y1WGQ5
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.874
A0A1Y1WM81
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.874
A0A1Y1WMZ9
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.872
A0A1Y1W5R5
Uncharacterized protein.
   
 0.871
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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