STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VT06Malic enzyme. (554 aa)    
Predicted Functional Partners:
A0A1Y1WAW5
Fumarate hydratase rhizopus oryzae.
  
 
 0.770
A0A1Y1WC78
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.737
A0A1Y1W3Y7
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.708
A0A1Y1WK06
Citrate synthase; Belongs to the citrate synthase family.
  
 0.696
A0A1Y1WIW3
Malate synthase; Belongs to the malate synthase family.
    
 0.674
A0A1Y1WMN0
PLP-dependent transferase.
  
 0.662
A0A1Y1VWD3
Six-hairpin glycosidase.
  
 0.659
A0A1Y1VWE1
Six-hairpin glycosidase.
  
 0.659
A0A1Y1W5F0
Six-hairpin glycosidase.
  
 0.659
A0A1Y1W5F4
Glyco_hydro_15 domain-containing protein.
  
 0.659
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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