STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VT55Calcium-dependent phosphotriesterase. (340 aa)    
Predicted Functional Partners:
A0A1Y1VRB3
Uncharacterized protein.
  
 
 0.727
A0A1Y1WKR0
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.720
A0A1Y1W4Y3
Isochorismatase hydrolase.
  
 
  0.704
A0A1Y1W1D2
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.685
A0A1Y1W3W0
Actin-like ATPase domain-containing protein.
  
 
 0.678
A0A1Y1VZT0
Putative alcohol dehydrogenase.
  
 
 0.674
A0A1Y1W9E0
L-gulono-gamma-lactone oxidase.
  
 
 0.655
A0A1Y1WM78
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.653
A0A1Y1WKN3
Dihydroxy-acid dehydratase.
    
 0.647
A0A1Y1W752
NAD(P)-binding protein.
  
 
 0.626
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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