STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VVU9S-adenosyl-L-methionine-dependent methyltransferase. (260 aa)    
Predicted Functional Partners:
A0A1Y1W2W4
Rhodanese domain-containing protein.
 
      0.825
A0A1Y1WL00
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.663
A0A1Y1W4Q5
Amino_oxidase domain-containing protein.
    
 0.584
A0A1Y1VYI9
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
  0.577
A0A1Y1W4C6
PRTase-like protein.
  
 
  0.577
A0A1Y1WBE3
Uracil phosphoribosyltransferase.
  
 
  0.577
A0A1Y1WIA4
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
  0.577
A0A1Y1WJR5
Uridine kinase.
  
 
  0.577
A0A1Y1WCB0
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.567
A0A1Y1W2Y8
NADH-quinone oxidoreductase.
  
 
  0.548
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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