STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VXQ2Metallo-dependent phosphatase. (433 aa)    
Predicted Functional Partners:
A0A1Y1WBM2
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
    
 
 0.616
A0A1Y1W0J3
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
  0.517
A0A1Y1WN72
Putative negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
  0.517
A0A1Y1W8L3
TPR-like protein.
      
 0.491
A0A1Y1WAS6
Cullin-1; Belongs to the cullin family.
    
  0.444
A0A1Y1WE22
Cullin-domain-containing protein; Belongs to the cullin family.
    
  0.444
A0A1Y1W469
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 
 0.438
A0A1Y1WFL7
Uncharacterized protein.
    
 
 0.438
A0A1Y1W0D7
PigN-domain-containing protein.
  
 
 
 0.425
A0A1Y1W848
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.407
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.