STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VYF2Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (336 aa)    
Predicted Functional Partners:
A0A1Y1WCT9
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
A0A1Y1WLP7
Putative isocitrate dehydrogenase.
  
0.986
A0A1Y1W202
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.951
A0A1Y1WIN4
Aconitate hydratase.
  
 0.944
A0A1Y1W0A8
ATP synthase subunit gamma.
  
 
 0.893
A0A1Y1W8C3
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.874
A0A1Y1WJ60
Dihydrolipoyl dehydrogenase.
  
 0.865
A0A1Y1W920
Oxoglutarate dehydrogenase, E1 component.
  
 0.863
A0A1Y1WK06
Citrate synthase; Belongs to the citrate synthase family.
  
 0.844
A0A1Y1WES9
Glutamate synthase.
  
 
 0.828
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.