STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VYF3Ras-domain-containing protein. (110 aa)    
Predicted Functional Partners:
A0A1Y1W525
RhoGAP-domain-containing protein.
    
 0.951
A0A1Y1WBL7
Ras-GAP domain-containing protein.
    
 0.876
A0A1Y1WG14
Ras GEF.
  
 
 0.864
A0A1Y1VXD8
Rho GTPase activation protein.
  
 
 0.860
A0A1Y1WBV8
Ras GEF.
  
 
 0.855
A0A1Y1W105
Rap-GAP domain-containing protein.
    
 0.848
A0A1Y1VRY0
Uncharacterized protein.
    
 0.845
A0A1Y1VXZ7
Ras GEF.
  
 
 0.831
A0A1Y1VZS1
RhoGAP-domain-containing protein.
    
 0.821
A0A1Y1W259
Phosphoinositide phospholipase C.
    
 0.821
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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