Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VZ95Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
A0A1Y1WDV8
Lysophospholipase.
    
 0.888
A0A1Y1WBQ3
Uncharacterized protein.
   
 0.861
A0A1Y1WLK1
HAD hydrolase.
   
 0.861
A0A1Y1VTG6
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
 0.855
A0A1Y1WIB6
Uncharacterized protein.
    
 0.807
A0A1Y1WIE0
Uncharacterized protein.
    
 0.807
A0A1Y1W4E7
Uncharacterized protein.
    
   0.789
A0A1Y1WJM6
DCP2-domain-containing protein.
    
   0.789
A0A1Y1WBI4
GTPase of the Ypt/Rab family.
   
 0.780
A0A1Y1W1J6
NARG2_C domain-containing protein.
    
 0.760
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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