STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VZS9P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the small GTPase superfamily. Arf family. (187 aa)    
Predicted Functional Partners:
A0A1Y1W525
RhoGAP-domain-containing protein.
    
 0.945
A0A1Y1VZS1
RhoGAP-domain-containing protein.
    
 0.821
A0A1Y1W6I5
Ras family protein.
   
0.804
A0A1Y1W660
E set domain-containing protein.
    
 0.767
A0A1Y1WAG7
Uncharacterized protein.
   
 0.761
A0A1Y1WHH0
BRO1-domain-containing protein.
    
 0.757
A0A1Y1WNA8
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.747
A0A1Y1WIW2
PX domain-containing protein.
    
 0.737
A0A1Y1W8Y9
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.733
A0A1Y1VW43
Uncharacterized protein.
    
 0.718
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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