STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W0Q4Replication factor C subunit 1. (913 aa)    
Predicted Functional Partners:
A0A1Y1W7Y0
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A1Y1WD63
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A1Y1WGC4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.999
A0A1Y1WML5
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A1Y1WA18
DNA/RNA polymerase.
   
 0.994
A0A1Y1W6D0
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 0.911
A0A1Y1VUK1
Vezatin domain-containing protein.
   
 0.907
A0A1Y1VW55
Vezatin domain-containing protein.
   
 0.907
A0A1Y1W1L7
Vezatin domain-containing protein.
   
 0.907
A0A1Y1WBN3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.907
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.