STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W197Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
A0A1Y1W5L1
Uncharacterized protein.
   
 0.977
A0A1Y1VYC5
RNA-binding domain-containing protein.
   
 0.922
A0A1Y1W0Z0
RNA-binding domain-containing protein.
   
 0.922
A0A1Y1VZ85
Uncharacterized protein.
    
 0.801
A0A1Y1WD63
P-loop containing nucleoside triphosphate hydrolase protein.
   
  
 0.786
A0A1Y1W3E0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
     
 0.732
A0A1Y1VPU8
WD40 repeat-like protein.
     
 0.709
A0A1Y1W682
Uncharacterized protein.
    
  0.666
A0A1Y1W867
EF-hand.
   
 0.652
A0A1Y1WBL7
Ras-GAP domain-containing protein.
   
 
  0.630
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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