STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W1D1Zip-domain-containing protein. (450 aa)    
Predicted Functional Partners:
A0A1Y1W3B1
SMP-LTD domain-containing protein.
    
 0.753
A0A1Y1W6B3
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 0.662
A0A1Y1W2P5
Bac_surface_Ag domain-containing protein.
    
 
 0.596
A0A1Y1WD02
GST C-terminal domain-containing protein.
    
 
 0.585
A0A1Y1W3P1
Uncharacterized protein.
   
 
 0.511
A0A1Y1W3E5
Iron permease FTR1.
    
 0.473
A0A1Y1WJG7
Zip-domain-containing protein.
   
 
 0.467
A0A1Y1WEV3
Zinc/iron permease.
   
 
 0.440
A0A1Y1VVE0
Uncharacterized protein.
    
 0.431
A0A1Y1W034
Protein kinase, X-linked.
    
 0.431
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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