STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W1X3RWD domain-containing protein. (228 aa)    
Predicted Functional Partners:
A0A1Y1WJG8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.990
A0A1Y1WL26
Putative GTP-binding protein.
   
 
 0.925
A0A1Y1W0B8
Translation machinery-associated protein 22.
   
    0.794
A0A1Y1WB92
Uncharacterized protein.
   
 
 0.714
A0A1Y1VXI7
Uncharacterized protein.
    
 
 0.684
A0A1Y1WNI4
ARM repeat-containing protein.
    
 
 0.684
A0A1Y1VT20
Kinase-like protein; Belongs to the protein kinase superfamily.
    
   0.639
A0A1Y1WPG0
Protein kinase domain-containing protein.
    
   0.639
A0A1Y1W8A9
NUC153 domain-containing protein.
   
   0.602
A0A1Y1WMA4
UPF0029-domain-containing protein.
    
 
 0.509
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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