STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W2N5Saccharopine dehydrogenase. (437 aa)    
Predicted Functional Partners:
A0A1Y1W078
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
 0.962
A0A1Y1VXJ5
Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.
 
 
 0.883
A0A1Y1W9P4
L-aminoadipate-semialdehyde dehydrogenase.
  
 
 0.836
A0A1Y1WDB3
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.789
A0A1Y1W8D6
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.767
A0A1Y1WDM7
S-adenosylmethionine decarboxylase.
     
 0.698
A0A1Y1WLP7
Putative isocitrate dehydrogenase.
   
  
 0.687
A0A1Y1WH67
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
  0.672
A0A1Y1W4Q5
Amino_oxidase domain-containing protein.
  
 
  0.671
A0A1Y1W3R3
Alkyl transferase; Belongs to the UPP synthase family.
      0.648
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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