STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W2Q0Uncharacterized protein. (1044 aa)    
Predicted Functional Partners:
A0A1Y1WFN4
Uncharacterized protein.
    
 0.886
A0A1Y1WMN5
Oxidoreductase.
    
 0.886
A0A1Y1W848
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.879
A0A1Y1WIG5
PIG-U-domain-containing protein.
   
 0.858
A0A1Y1VYP0
Gaa1-domain-containing protein.
    
 0.852
A0A1Y1WDM6
Gpi16 subunit, GPI transamidase component.
    
 0.848
A0A1Y1WKY8
Mannosyltransferase.
    
 0.844
A0A1Y1VUX1
Uncharacterized protein.
    
 0.803
A0A1Y1VXG2
Uncharacterized protein.
    
 0.803
A0A1Y1WDV8
Lysophospholipase.
   
 
 0.788
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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