STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W3D2Histone-fold-containing protein. (190 aa)    
Predicted Functional Partners:
A0A1Y1WH79
Histone-fold-containing protein.
   
 
 0.990
A0A1Y1WP52
TBP-domain-containing protein.
    
 
 0.984
A0A1Y1W6Z8
Uncharacterized protein.
    
 
 0.906
A0A1Y1W0T2
Nuclear transcription factor Y subunit B-3.
    
 
 0.636
A0A1Y1WGF4
Cyclin-like protein.
    
 
 0.567
A0A1Y1WHL3
Cyclin-like protein.
    
 
 0.567
DL89DRAFT_9986
Uncharacterized protein.
    
 
 0.531
A0A1Y1VSB2
Histone-fold-containing protein.
    
 
 0.509
A0A1Y1VQB9
Fungal_trans domain-containing protein.
    
 0.468
A0A1Y1VR31
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.468
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.