STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W3Q9Uncharacterized protein. (985 aa)    
Predicted Functional Partners:
A0A1Y1W6V6
Chitin synthase; Plays a major role in cell wall biogenesis.
  
 
0.807
A0A1Y1WB13
Nucleotide-diphospho-sugar transferase.
   
 
 0.719
A0A1Y1WAG7
Uncharacterized protein.
  
 0.718
A0A1Y1VWP1
Uncharacterized protein.
  
 0.698
A0A1Y1W1V9
TPR-like protein.
  
 0.698
A0A1Y1W224
Uncharacterized protein.
  
 0.698
A0A1Y1W8L3
TPR-like protein.
  
 0.698
A0A1Y1W9S9
TPR-like protein.
  
 0.698
A0A1Y1WB69
Uncharacterized protein.
  
 0.698
A0A1Y1WC11
TPR-like protein.
  
 0.698
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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