STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W601MYND-type domain-containing protein. (416 aa)    
Predicted Functional Partners:
A0A1Y1VXF4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.811
A0A1Y1W4A6
Ribosomal_S5_C domain-containing protein.
    
 
 0.657
A0A1Y1WEC3
Uncharacterized protein.
   
  
 0.603
A0A1Y1W8S1
Uncharacterized protein.
   
 
 0.556
A0A1Y1WI00
Uncharacterized protein.
   
  
 0.540
A0A1Y1VZ62
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.530
A0A1Y1WHY5
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.530
A0A1Y1WH97
WD40 repeat-like protein.
   
 
 0.506
A0A1Y1WMF7
WD40 repeat-like protein.
   
 
 0.506
A0A1Y1W2J9
TPR-like protein.
   
  
 0.501
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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