STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W628Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
A0A1Y1WDW9
Ribonucleoside-diphosphate reductase large subunit.
  
 0.997
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
  
 0.917
A0A1Y1W6Q1
DNA helicase; Belongs to the MCM family.
   
  
 0.911
A0A1Y1WCU8
DNA helicase; Belongs to the MCM family.
   
  
 0.910
A0A1Y1WJW9
Thymidylate synthase.
   
  
 0.908
A0A1Y1W1V8
Nucleic acid-binding protein.
   
  
 0.895
A0A1Y1W484
DNA helicase; Belongs to the MCM family.
   
  
 0.895
A0A1Y1WLZ3
MCM-domain-containing protein; Belongs to the MCM family.
   
  
 0.892
A0A1Y1VTG6
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 
 0.826
A0A1Y1WHZ9
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.787
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.