STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W6A6Alkaline phytoceramidase. (281 aa)    
Predicted Functional Partners:
A0A1Y1WFN4
Uncharacterized protein.
     
 0.799
A0A1Y1WMN5
Oxidoreductase.
     
 0.799
A0A1Y1W8L9
Endonuclease/exonuclease/phosphatase.
    
 0.618
A0A1Y1W9J0
DAGKc domain-containing protein.
    
 0.608
A0A1Y1VYH9
DAGKc domain-containing protein.
    
 0.568
A0A1Y1WHU8
acidPPc domain-containing protein.
     
 0.563
A0A1Y1WD52
Longevity assurance proteins LAG1/LAC1.
    
 0.556
A0A1Y1WE13
Uncharacterized protein.
    
 0.556
A0A1Y1WLQ8
LAG1-domain-containing protein.
    
 0.556
A0A1Y1VVV5
Uncharacterized protein.
     
 0.529
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.