STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W6B1Histone H3; Belongs to the histone H3 family. (117 aa)    
Predicted Functional Partners:
A0A1Y1W6I2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.973
A0A1Y1WFS6
Histone H2B; Belongs to the histone H2B family.
 
 
 0.961
A0A1Y1WFT7
Histone H2B.1; Belongs to the histone H2B family.
 
 
 0.961
A0A1Y1VZK2
JmjC-domain-containing protein.
    
 0.935
A0A1Y1WFF1
Histone H2A; Belongs to the histone H2A family.
 
 
 0.911
A0A1Y1WLB5
SET domain-containing protein.
 
 
 0.886
A0A1Y1VSI6
Histone-fold-containing protein; Belongs to the histone H2B family.
 
 
 0.884
A0A1Y1WGI9
Histone H2A; Belongs to the histone H2A family.
 
 
 0.883
A0A1Y1WGB4
Histone H2A; Belongs to the histone H2A family.
 
 
 0.881
A0A1Y1W125
WD40 repeat-like protein.
   
 0.879
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.