STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W7N6RabGAP/TBC. (375 aa)    
Predicted Functional Partners:
A0A1Y1WEC9
Ras-domain-containing protein.
    
 0.996
A0A1Y1WLI4
Uncharacterized protein.
    
 0.844
A0A1Y1WDF5
Ras-related protein rab-2-A.
    
 0.613
A0A1Y1W099
Protein YIP.
 
      0.605
A0A1Y1WE05
TBC-domain-containing protein.
      
 0.459
A0A1Y1VYL8
RabGAP/TBC.
   
  
 0.458
A0A1Y1WF98
Cytosolic Fe-S cluster assembly factor; Belongs to the NARF family.
   
  
 0.456
A0A1Y1WAM8
RAB18A, member ras oncogene family.
      
 0.420
A0A1Y1WLJ7
RAB3GAP2_N domain-containing protein.
      
 0.416
A0A1Y1WG24
SAICAR synthase-like protein.
    
 
 0.408
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.