STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W8B0Uncharacterized protein. (399 aa)    
Predicted Functional Partners:
A0A1Y1VYK8
Asp-domain-containing protein; Belongs to the peptidase A1 family.
    
 0.659
A0A1Y1VZB2
Acid protease; Belongs to the peptidase A1 family.
    
 0.659
A0A1Y1W231
Acid protease; Belongs to the peptidase A1 family.
    
 0.659
A0A1Y1W3V6
Acid protease; Belongs to the peptidase A1 family.
    
 0.659
A0A1Y1WHA1
Acid protease; Belongs to the peptidase A1 family.
    
 0.659
A0A1Y1WCR3
Snare-like protein; Belongs to the synaptobrevin family.
   
  0.642
A0A1Y1VYE4
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
  0.624
A0A1Y1WF81
Zincin.
   
 0.623
A0A1Y1WFC5
Leukotriene A4 hydrolase.
   
 0.623
A0A1Y1W0T8
Aminopeptidase.
   
 0.617
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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