STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W8B9P-loop containing nucleoside triphosphate hydrolase protein. (614 aa)    
Predicted Functional Partners:
A0A1Y1WA24
tRNA_int_endo domain-containing protein.
    
 0.587
A0A1Y1WJ30
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.566
A0A1Y1W0A8
ATP synthase subunit gamma.
   
   0.549
A0A1Y1W7M6
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.545
A0A1Y1W421
TAP42-like protein.
    
 0.542
A0A1Y1W5F7
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 
 0.536
A0A1Y1WJQ2
1,4-alpha-glucan-branching enzyme.
   
 
  0.526
A0A1Y1WIH7
F1F0 ATP synthase delta subunit.
   
   0.525
A0A1Y1W7K5
Cytochrome oxidase assembly.
    
 0.524
A0A1Y1WHN8
F-box domain-containing protein.
    
 0.524
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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