STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W8L4Uncharacterized protein. (293 aa)    
Predicted Functional Partners:
A0A1Y1WAS6
Cullin-1; Belongs to the cullin family.
   
 0.864
A0A1Y1WE22
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.864
A0A1Y1WJZ5
Cullin-3; Belongs to the cullin family.
   
 0.864
A0A1Y1WD20
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.843
A0A1Y1W958
Putative RING-box protein 1A.
    
 0.749
A0A1Y1W068
26S proteasome subunit P45.
   
  0.695
A0A1Y1WKR5
26S proteasome subunit P45; Belongs to the AAA ATPase family.
   
  0.695
A0A1Y1WFE2
Ubiquitin-domain-containing protein.
    
 0.689
A0A1Y1WDA6
26S proteasome subunit P45; Belongs to the AAA ATPase family.
   
  0.687
A0A1Y1W4B3
Ubiquitin.
    
 0.672
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.