STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W9D32-amino-3-ketobutyrate coenzyme A ligase. (391 aa)    
Predicted Functional Partners:
A0A1Y1W0U9
Tryptophan synthase.
    
 0.864
A0A1Y1W9T1
NAD(P)-binding protein.
  
 
 0.862
A0A1Y1VZT0
Putative alcohol dehydrogenase.
  
 
 0.853
A0A1Y1WBT2
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.836
A0A1Y1WFN4
Uncharacterized protein.
     
 0.836
A0A1Y1WMN5
Oxidoreductase.
     
 0.836
A0A1Y1WHJ7
DAO-domain-containing protein.
  
 0.831
A0A1Y1W3U4
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.789
A0A1Y1WIR9
Aminotran_5 domain-containing protein.
    
 0.786
A0A1Y1W0U0
Uncharacterized protein.
  
 
 0.773
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.