STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WAF5ARM repeat-containing protein. (1462 aa)    
Predicted Functional Partners:
A0A1Y1WFP3
Mov34-domain-containing protein.
   
 
 0.918
A0A1Y1WLK6
PCI domain-containing protein.
   
 
 0.911
A0A1Y1WKR5
26S proteasome subunit P45; Belongs to the AAA ATPase family.
    
 
 0.900
A0A1Y1WFG9
PCI domain-containing protein.
    
 
 0.890
A0A1Y1W2W1
PCI-domain-containing protein.
    
 
 0.885
A0A1Y1WCV5
Mov34-domain-containing protein.
   
 
 0.875
A0A1Y1WDA6
26S proteasome subunit P45; Belongs to the AAA ATPase family.
    
 
 0.875
A0A1Y1WN52
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
   
 
 0.874
A0A1Y1WGB1
PCI domain-containing protein.
   
 
 0.869
A0A1Y1WAU8
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 
 0.864
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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