STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WAF8NADH dehydrogenase. (505 aa)    
Predicted Functional Partners:
A0A1Y1WEX4
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.702
A0A1Y1W186
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  0.657
A0A1Y1W6M0
Cytochrome c1.
   
 
 0.599
A0A1Y1W2Y8
NADH-quinone oxidoreductase.
  
 
 0.594
A0A1Y1W233
NADH dehydrogenase iron-sulfur protein 7; Belongs to the complex I 20 kDa subunit family.
   
 
 0.569
A0A1Y1W6A4
NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.
    
 0.567
A0A1Y1WMD7
Thioredoxin reductase.
    
 0.565
A0A1Y1WJ79
Uncharacterized protein.
     
 0.564
A0A1Y1WHE6
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like protein; Belongs to the complex I 75 kDa subunit family.
     
 0.559
A0A1Y1WKL2
Or F420H2 dehydrogenase; Belongs to the complex I 30 kDa subunit family.
     
 0.556
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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