STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WAK9WD40 repeat-like protein. (477 aa)    
Predicted Functional Partners:
A0A1Y1WDQ4
CPSF_A domain-containing protein.
    
 0.954
A0A1Y1VYM2
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.841
A0A1Y1VZL9
PCI domain-containing protein.
    
  0.794
A0A1Y1WNG1
MPN domain-containing protein.
    
  0.791
A0A1Y1VXG5
Uncharacterized protein.
    
  0.788
A0A1Y1WJV4
PCI domain-containing protein.
    
  0.758
A0A1Y1WCQ2
MPN domain-containing protein.
    
  0.756
A0A1Y1WBY7
PCI domain-containing protein.
    
  0.745
A0A1Y1WFP6
PCI domain-containing protein.
    
  0.707
A0A1Y1WKD7
WD40 repeat-like protein.
     
 0.694
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.